STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC1LRCC1-like G exchanging factor-like protein. (481 aa)    
Predicted Functional Partners:
PDE6D
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
    
 
 0.645
SMIM14
Small integral membrane protein 14.
      
 0.585
APOB
Apolipoprotein B.
      
 0.583
LRPAP1
Alpha-2-macroglobulin receptor-associated protein.
      
 0.580
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 0.551
RAN
GTP-binding nuclear protein Ran.
    
 0.547
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
    
 0.544
TRUB2
Mitochondrial mRNA pseudouridine synthase TRUB2.
    
 
 0.528
NME6
NME/NM23 nucleoside diphosphate kinase 6.
    
 
 0.525
NEK6
NIMA (never in mitosis gene a)-related kinase 6.
    
 0.516
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.