STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXJ1Forkhead box protein J1. (449 aa)    
Predicted Functional Partners:
SFTPC
Surfactant protein C.
      
 0.581
C6orf118
Chromosome unknown open reading frame, human C6orf118.
   
    0.538
CFTR
Cystic fibrosis transmembrane conductance regulator.
   
  
 0.507
MCIDAS
Multiciliate differentiation and DNA synthesis associated cell cycle protein.
      
 0.465
RFX2
Regulatory factor X 1/2/3.
    
 
 0.434
RFX1
Regulatory factor X1.
    
 
 0.434
RFX3
Regulatory factor X3.
    
 
 0.434
ASXL2
Additional sex combs like 2, transcriptional regulator.
    
 0.406
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.