STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAA30N-alpha-acetyltransferase 30. (139 aa)    
Predicted Functional Partners:
NAA35
N-alpha-acetyltransferase 35, NatC auxiliary subunit.
   
 0.996
NAA38
N(Alpha)-acetyltransferase 38, NatC auxiliary subunit.
    
 0.955
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.710
NAA40
N-alpha-acetyltransferase 40.
   
  
 0.706
NAA20
N-alpha-acetyltransferase 20.
      
 0.701
NAA10-1
N-alpha-acetyltransferase 10 isoform A.
      
0.701
NAA25
N-alpha-acetyltransferase 25, NatB auxiliary subunit.
      
 0.701
NAA50-1
N-alpha-acetyltransferase 50 isoform B.
   
  
0.663
TM4SF19
Transmembrane 4 L6 family member 19.
      
 0.572
LEPROTL1
Leptin receptor overlapping transcript-like 1.
      
 0.553
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.