STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNASET2Ribonuclease T2; Belongs to the RNase T2 family. (307 aa)    
Predicted Functional Partners:
APLP2-1
Amyloid-like protein 2 isoform A.
      
 0.617
UBL5
Ubiquitin-like protein 5.
   
  
 0.580
GLG1
Golgi apparatus protein 1.
      
 0.565
FGFR1OP-1
FGFR1 oncogene partner isoform A.
      
 0.543
SORD
Sorbitol dehydrogenase.
   
  
 0.540
PUS7L
Pseudouridylate synthase 7-like protein-like protein.
      
 0.538
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
      
 0.444
CYB5R4
Cytochrome b5 reductase 4 isoform A.
   
 
 0.439
APP
BPTI/Kunitz inhibitor domain-containing protein.
      
 0.432
PQLC2
Lysosomal amino acid transporter 1-like protein.
      
 0.410
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.