STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUNH1orf198DUF4706 domain-containing protein. (332 aa)    
Predicted Functional Partners:
AICDA
Single-stranded DNA cytosine deaminase.
   
 0.989
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.983
UQCRQ
Cytochrome b-c1 complex subunit 8.
   
 0.978
CYC1
Cytochrome c1, heme protein, mitochondrial.
   
 0.974
COX6A1
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.962
Y1Q_0020518
Cytochrome c oxidase subunit 6A2, mitochondrial; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.962
UQCRC2
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
 0.961
COX6C
Cytochrome c oxidase subunit 6C.
   
 0.958
NDUFS6
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.
   
 
 0.939
COX7B
Cytochrome c oxidase subunit 7B, mitochondrial.
   
 0.936
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.