STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYA4Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (645 aa)    
Predicted Functional Partners:
TBPL1
TATA box-binding protein-like protein 1.
   
  
 0.682
HBS1L
HBS1-like protein.
      
 0.678
ALDH8A1
Aldehyde dehydrogenase family 8 member A1; Belongs to the aldehyde dehydrogenase family.
      
 0.675
SIX5
Homeobox protein SIX5.
   
 
 0.598
SIX4
Homeobox protein SIX4.
   
 
 0.598
SIX2
Homeobox protein SIX2 isoform A.
   
 
 0.598
TCF21
Transcription factor 21.
 
    
 0.537
Y1Q_0002589
Homeobox domain-containing protein.
   
 
 0.524
ANHX
Anomalous homeobox protein.
   
 
 0.524
SIX3
Homeobox protein SIX3.
   
 
 0.524
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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