STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM55BPhosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (208 aa)    
Predicted Functional Partners:
MTMR4
Myotubularin-related protein 4 isoform A.
 
   
 0.921
PIP4K2B
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta.
     
 0.912
PIP4K2A
PIPK domain-containing protein.
     
 0.912
PIP4K2C
Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma.
     
 0.912
MTMR3
Uncharacterized protein.
 
   
 0.910
PIP5K1B
PIPK domain-containing protein.
     
  0.907
PIP5K1C
Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma.
     
  0.907
INPP5E
Inositol polyphosphate 5-phosphatase.
     
 0.902
MTM1-2
Uncharacterized protein.
 
   
 0.902
MTMR1
Uncharacterized protein.
 
   
 0.902
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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