STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM102BProtein FAM102B. (361 aa)    
Predicted Functional Partners:
SEC61G
Protein transport protein Sec61 subunit gamma.
   
 
 0.639
GPSM2
G-protein-signaling modulator 2.
    
 
 0.569
PIN1
Peptidyl-prolyl cis-trans isomerase.
    
 0.459
PI4KA
Phosphatidylinositol 4-kinase alpha isoform A; Belongs to the PI3/PI4-kinase family.
   
 0.455
PCP2
Purkinje cell 2-like protein.
    
 
 0.445
Y1Q_0018109
FERM domain-containing protein.
    
 0.418
TLN2
Talin-2.
    
 0.418
MESDC1
Mesoderm development candidate 1.
    
 0.418
TLN2-2
Uncharacterized protein.
    
 0.418
Y1Q_0015395
Talin-1-like.
    
 0.418
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.