STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMPK1UMP-CMP kinase isoform B; Belongs to the adenylate kinase family. (235 aa)    
Predicted Functional Partners:
CMPK2
UMP-CMP kinase 2, mitochondrial.
    
 0.967
RRM1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
 0.955
UMPS
Uridine 5'-monophosphate synthase.
   
 0.949
UCK2
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.947
NME4
Nucleoside diphosphate kinase.
  
 
 0.947
UPRT
Uracil phosphoribosyltransferase-like protein.
  
 
 0.945
DUT
Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial.
  
 0.940
UCKL1
Uridine-cytidine kinase-like 1.
    
 0.935
UCKL1-2
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.935
UCK1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.933
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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