STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPC2Glypican-5-like; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (397 aa)    
Predicted Functional Partners:
Y1Q_0013254
Glypican-5-like; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
 
      0.852
ACP7
Purple acid phosphatase.
      
 0.666
TMLHE
Trimethyllysine dioxygenase, mitochondrial.
      
 0.666
CEP57
Centrosomal protein of isoform B.
      
 0.592
PI15
Peptidase inhibitor 15; Belongs to the CRISP family.
      
 0.560
NOTUM
Palmitoleoyl-protein carboxylesterase NOTUM.
    
 0.555
CREB3L1
Cyclic AMP-responsive element-binding protein 3-like protein 1.
      
 0.555
CREB3
Cyclic AMP-responsive element-binding protein 3.
      
 0.555
Y1Q_0008226
Uncharacterized protein.
    
 0.555
UNC5D
Uncharacterized protein.
    
 
 0.538
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.