STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF276Zinc finger protein 276. (482 aa)    
Predicted Functional Partners:
NAIF1
Nuclear apoptosis-inducing factor 1.
      
 0.589
CCNL2
Cyclin-L2; Belongs to the cyclin family.
   
  
 0.572
SRBD1
S1 RNA-binding domain-containing protein 1.
    
 
 0.563
CCNL1
Cyclin-L1 isoform B; Belongs to the cyclin family.
   
  
 0.554
VPS9D1
VPS9 domain-containing protein 1.
      
 0.551
ZNF827
Zinc finger protein 827 isoform A.
      
0.539
CCNK
Cyclin-K; Belongs to the cyclin family.
     
 0.529
SPIRE2
Spire-like protein 2.
    
 0.525
DCLRE1A
DNA cross-link repair 1A protein.
    
 
 0.475
RNF166
RING finger protein 166.
    
 0.453
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.