STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0023210Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
Y1Q_0007743
Ig-like domain-containing protein.
  
 0.660
Y1Q_0020561
Ig-like domain-containing protein.
  
 0.627
PLAT
Plasminogen activator; Belongs to the peptidase S1 family.
    
  0.593
CD79B
B-cell antigen receptor complex-associated protein beta chain.
   
 0.589
CD79A
B-cell antigen receptor complex-associated protein alpha chain.
   
 0.569
MAPT-1
Microtubule-associated protein.
    
   0.569
TNFRSF13C
Tumor necrosis factor receptor superfamily member 13C.
   
 
 0.568
MS4A1
B-lymphocyte antigen CD20.
   
 0.549
KXD1
KxDL motif-containing protein 1.
    
  0.522
Y1Q_0020557
Ig-like domain-containing protein.
  
  0.517
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.