STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC41A1Uncharacterized protein. (517 aa)    
Predicted Functional Partners:
SLC26A1-2
Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.721
SLC26A1
Sulfate anion transporter 1.
      
 0.692
SLC41A2
Solute carrier family 41 member 2.
   
 
  0.587
MMGT1
Membrane magnesium transporter 1.
      
 0.579
MRS2
Magnesium transporter.
      
 0.578
NUCKS1
Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1.
 
    
 0.573
CNNM4
Metal transporter CNNM4 isoform A.
      
 0.487
CLDN16
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.471
RAB29
Ras-related protein Rab-7L1.
      
 0.465
PM20D1
Putative carboxypeptidase PM20D1.
      
 0.465
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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