STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELF5ETS-related transcription factor Elf-5 isoform B. (307 aa)    
Predicted Functional Partners:
MED23
Mediator of RNA polymerase II transcription subunit 23.
   
 
 0.628
EOMES
Eomesodermin-like protein isoform B.
      
 0.585
PNN
Pinin isoform B.
    
 
 0.474
VTCN1
V-set domain-containing T-cell activation inhibitor 1.
      
 0.470
KIF26B
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.470
CREB3L2
Cyclic AMP-responsive element-binding protein 3-like protein 2.
   
  
 0.469
GATA3
Trans-acting T-cell-specific transcription factor GATA-3.
   
  
 0.467
PRKCZ
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
  0.435
PRKCZ-2
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
  0.435
Y1Q_0000804
WAP domain-containing protein.
    
 
 0.429
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.