STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRVI1Protein MRVI1. (1926 aa)    
Predicted Functional Partners:
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.965
ITPR2-2
Uncharacterized protein.
    
 0.965
ITPR3
Uncharacterized protein.
    
 0.965
PRKG1-2
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.958
F13B
Coagulation factor XIII B chain.
    
 0.676
CD44
CD44 antigen.
     
0.669
Y1Q_0023796
Uncharacterized protein.
    
 0.666
LCP2
Lymphocyte cytosolic protein 2.
   
 0.629
LRRC3B
Leucine-rich repeat-containing protein 3B.
    
 0.627
CHP1
Calcineurin B-like proteinous protein 1.
    
  0.613
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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