STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAVCR1Hepatitis A virus cellular receptor 1. (276 aa)    
Predicted Functional Partners:
C3AR1
C3a anaphylatoxin chemotactic receptor; Belongs to the G-protein coupled receptor 1 family.
   
 0.521
CFP
Properdin.
    
 0.517
CFI
Complement factor I; Belongs to the peptidase S1 family.
    
 0.516
ITGAD
Integrin alpha-D; Belongs to the integrin alpha chain family.
    
 0.503
MRC1
Macrophage mannose receptor 1-like.
    
 0.491
PPP1R11
Protein phosphatase 1 regulatory subunit 11.
      
 0.472
SETD4
SET domain-containing protein 4.
      
 0.469
C1QA
Complement C1q subcomponent subunit A.
   
 0.460
COL3A1
Uncharacterized protein.
    
 0.437
SERPINE1
Serpin E3-like; Belongs to the serpin family.
    
 0.430
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.