STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C4General transcription factor 3C polypeptide 4. (234 aa)    
Predicted Functional Partners:
GTF3C1
General transcription factor 3C polypeptide 1 isoform B.
   
 0.949
GTF3C2
General transcription factor 3C polypeptide 2.
    
 0.927
GTF3C3
General transcription factor 3C polypeptide 3 isoform B.
   
 0.925
GTF3C6
General transcription factor 3C polypeptide 6.
    
 0.877
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.808
ZNF512B
Zinc finger protein 512B isoform A.
    
 0.800
ZNF512
Zinc finger protein 512 isoform A.
    
 0.800
BRF1
Transcription factor IIIB subunit.
     
 0.788
Y1Q_0014807
CYCLIN domain-containing protein.
     
 0.788
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.719
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.