STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5-2Uncharacterized protein. (1677 aa)    
Predicted Functional Partners:
C5AR1
C5a anaphylatoxin chemotactic receptor 1; Belongs to the G-protein coupled receptor 1 family.
    
 0.980
C9
Complement component C9.
   
 0.967
C3
Uncharacterized protein.
   
0.952
Y1Q_0015778
Uncharacterized protein.
   
0.950
C8A
Complement component C8 alpha chain.
   
 0.947
C8G
Complement component C8 gamma chain; Belongs to the calycin superfamily. Lipocalin family.
   
 0.925
C3AR1
C3a anaphylatoxin chemotactic receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.814
CFI
Complement factor I; Belongs to the peptidase S1 family.
   
 0.764
CFB-2
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.762
CFB
Complement factor B.
   
 0.762
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.