STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP77Uncharacterized protein. (237 aa)    
Predicted Functional Partners:
SPACA9
Uncharacterized protein.
   
 
 0.572
CUNH5orf49
Uncharacterized protein.
   
   0.522
EFHB
EF-hand domain-containing family member B isoform B.
   
   0.513
CUNH1orf158
Uncharacterized protein.
   
   0.502
CUNH1orf194
Uncharacterized protein.
   
   0.501
CUNH11orf1
Uncharacterized protein.
   
   0.501
ENKUR
Enkurin.
   
   0.501
CFAP126
Protein Flattop.
   
   0.498
CUNH9orf135
Uncharacterized protein.
    
   0.487
SPAG8
Sperm-associated antigen 8 isoform A.
    
   0.487
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.