STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MORN5MORN repeat-containing protein 5. (172 aa)    
Predicted Functional Partners:
MORN3
MORN repeat-containing protein 3.
   
  
 0.626
MORN4
MORN repeat-containing protein 4.
      
 0.604
RABGEF1
Rab5 GDP/GTP exchange factor isoform C.
    
 0.598
EFCAB1
EF-hand calcium-binding domain-containing protein 1.
   
   0.588
PEBP4-1
Phosphatidylethanolamine-binding protein 4 isoform A.
      
 0.542
MNS1
Meiosis-specific nuclear structural protein 1.
    
 
 0.511
TEX33
Testis-expressed sequence 33 protein.
      
 0.476
CFAP161
Uncharacterized protein.
   
  
 0.414
PACRG
Parkin coregulated protein.
   
  
 0.407
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.