STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR64WD repeat-containing protein 64. (1106 aa)    
Predicted Functional Partners:
RGS7
Regulator of G-protein signaling 7 isoform B.
   
  
 0.667
CTTNBP2NL
CTTNBP2 N-terminal-like protein.
   
 
 0.666
MOB4
MOB-like protein phocein.
   
 
 0.661
STRIP1
Striatin-interacting protein 1.
    
 
 0.631
STRIP2
Uncharacterized protein.
    
 
 0.631
PDCD10
Programmed cell death protein 10.
    
 
 0.614
FGFR1OP2
FGFR1 oncogene partner 2.
    
 
 0.583
SIKE1-1
Suppressor of IKBKE 1 isoform A.
    
 
 0.583
NAGPA
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
      
 0.543
PPP2CA
Serine/threonine-protein phosphatase; Belongs to the SKP1 family.
   
 
 0.533
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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