STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPERTSpermatid-associated protein. (321 aa)    
Predicted Functional Partners:
UNC79
Unc-79-like protein isoform B.
    
 0.782
GTF2F2
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
 0.674
CCHCR1-1
Coiled-coil alpha-helical rod protein 1 isoform C.
    
 
 0.556
CBY3
Chibby-like protein 3.
     
 0.539
RANBP2
E3 SUMO-protein ligase RanBP2.
    
  0.513
WDFY2-2
Uncharacterized protein.
    
 0.463
CABYR
Calcium-binding tyrosine phosphorylation-regulated protein isoform A.
   
 0.460
ODF2L-1
Outer dense fiber protein 2-like isoform A.
      
 0.442
KDM6B-2
Uncharacterized protein.
    
 0.441
KDM6B
Lysine-specific demethylase 6B isoform A.
    
 0.441
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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