STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMO2Flavin-containing monooxygenase. (431 aa)    
Predicted Functional Partners:
GADL1-2
Uncharacterized protein.
   
 
 0.904
CSAD
Uncharacterized protein.
   
 
 0.904
ADO
2-aminoethanethiol dioxygenase.
     
  0.900
GADL1
Acidic amino acid decarboxylase GADL1.
   
 
 0.664
Y1Q_0008084
Uncharacterized protein.
   
 
 0.664
GAD2
Uncharacterized protein.
   
 
 0.664
GGT1
Gamma-glutamyltranspeptidase 1.
  
 
 0.657
GGT5
Gamma-glutamyltransferase 5.
  
 
 0.657
TM4SF1
Putative gamma-glutamyltransferase YwrD.
  
 
 0.657
GGT7
Gamma-glutamyltransferase 7.
  
 
 0.657
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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