STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC16DnaJ-like protein subfamily C member 16. (795 aa)    
Predicted Functional Partners:
HSPA9
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.596
CREBRF
CREB3 regulatory factor.
    
 0.580
HSPA4
Uncharacterized protein.
  
 0.571
HSPA4L
Heat shock protein 4L.
  
 0.561
HSPA4L-2
Uncharacterized protein.
  
 0.561
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.559
HSPA13
Heat shock protein 13.
  
 0.556
NME8
Thioredoxin domain-containing protein 3 isoform B.
  
 0.551
TSC1
Hamartin isoform B.
  
 0.546
HSP90AA1
Heat shock protein HSP 90-alpha.
  
 0.546
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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