STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFOvotransferrin; Belongs to the transferrin family. (738 aa)    
Predicted Functional Partners:
TFRC
Transferrin receptor protein 1.
  
 0.966
TFR2
Transferrin receptor protein 2 isoform B.
  
 0.676
SRPRB
Signal recognition particle receptor subunit beta.
 
      0.651
Y1Q_0018184
Uncharacterized protein.
   
 
 0.594
KNG1
Kininogen-1.
  
  
 0.593
Y1Q_0018186
Alpha-2-macroglobulin-like.
   
 
 0.592
SNCA
Alpha-synuclein; Belongs to the synuclein family.
     
 0.554
LYZ
Lysozyme; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Belongs to the glycosyl hydrolase 22 family.
    
 0.548
LYZL1
Lysozyme-like protein 1; Belongs to the glycosyl hydrolase 22 family.
    
 0.547
ALB-2
Uncharacterized protein.
   
  
 0.542
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.