STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUTM1NUT family member 1. (700 aa)    
Predicted Functional Partners:
PRDM15
PR domain zinc finger protein 15 isoform C.
   
 0.501
Y1Q_0011008
Uncharacterized protein.
  
     0.487
TP53I11
Tumor protein p53-inducible protein 11.
      
 0.487
ARMC12
Armadillo repeat-containing protein 12.
  
     0.487
CMC2
COX assembly mitochondrial protein.
      
 0.487
IFT81
Intraflagellar transport 81-like protein isoform B.
      
 0.487
AKAP4
A-kinase anchor protein 4.
  
     0.449
WDR18
WD repeat-containing protein 18.
   
 0.443
NSD3
Uncharacterized protein.
   
 
 0.428
Y1Q_0010284
Cathelicidin-related peptide Oh-Cath-like.
  
 
   0.427
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.