STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPCAT4Lysophospholipid acyltransferase LPCAT4. (763 aa)    
Predicted Functional Partners:
LCLAT1
Lysocardiolipin acyltransferase 1.
     
 0.957
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
  
 
0.945
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
  
 
0.945
MBOAT2
Lysophospholipid acyltransferase 2; Belongs to the membrane-bound acyltransferase family.
   
 0.939
LPCAT3
Lysophospholipid acyltransferase 5; Belongs to the membrane-bound acyltransferase family.
     
 0.932
CRLS1
Cardiolipin synthase (CMP-forming).
  
 
 0.928
LPGAT1
Acyl-CoA:lysophosphatidylglycerol acyltransferase 1.
     
 0.918
MBOAT1
Lysophospholipid acyltransferase 1; Belongs to the membrane-bound acyltransferase family.
    
 0.916
PISD
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
    
 0.914
PLD1
Phospholipase.
  
 
 0.913
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.