STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNMBPDynamin-binding protein isoform A. (768 aa)    
Predicted Functional Partners:
DNMBPL
Dynamin-binding protein.
 
     0.917
SCAPER
S phase cyclin A-associated protein in the endoplasmic reticulum isoform C.
      
 0.738
IARS2
Isoleucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.738
OPA1
Dynamin-like protein, mitochondrial isoform A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.698
TRIM44
Tripartite motif-containing protein 44.
    
 
 0.691
POC5-1
Centrosomal protein POC5 isoform B.
      
 0.689
IARSL
Isoleucine--tRNA ligase, cytoplasmic.
   
  
 0.688
BIN2
Bridging integrator 2.
    
 
 0.622
BIN1
Myc box-dependent-interacting protein 1 isoform A.
    
 
 0.622
AMPH
Amphiphysin isoform B.
    
 
 0.622
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.