STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPEB1Cytoplasmic polyadenylation element-binding protein 1 isoform D. (595 aa)    
Predicted Functional Partners:
AURKA
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.927
CCNB2
G2/mitotic-specific cyclin-B2; Belongs to the cyclin family.
   
 
 0.921
PLK1
Serine/threonine-protein kinase PLK.
   
 0.921
CDK1
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.920
CPEB4
Cytoplasmic polyadenylation element-binding protein 4.
   
0.918
CPEB2
Uncharacterized protein.
   
0.918
DDX6
Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.
   
 
 0.736
SYMPK
Symplekin.
    
 
 0.662
SYMPKL
Symplekin.
    
 
 0.662
BOLL-1
Protein boule-like isoform A.
   
 
 0.637
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.