STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A8Putative sodium-coupled neutral amino acid transporter 8. (309 aa)    
Predicted Functional Partners:
SLC38A9
Sodium-coupled neutral amino acid transporter 9.
      
 0.585
RRAGB
Ras-related GTP-binding protein A.
   
 0.580
LAMTOR2
Ragulator complex protein LAMTOR2.
    
 0.537
LAMTOR1
Ragulator complex protein LAMTOR1.
    
 0.501
LAMTOR5
Ragulator complex protein LAMTOR5.
    
 0.495
LAMTOR4
Ragulator complex protein LAMTOR4.
    
 0.476
RIMS2-2
Regulating synaptic membrane exocytosis protein 2-like.
   
 
 0.455
RIMS2A
Regulating synaptic membrane exocytosis protein 2 isoform C.
   
 
 0.455
RRAGD-2
Uncharacterized protein.
    
 0.430
RRAGD
Ras-related GTP-binding protein D.
    
 0.430
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.