STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GADD45GIP1Growth arrest and DNA damage-inducible proteins-interacting protein 1. (213 aa)    
Predicted Functional Partners:
MRPL11
39S ribosomal protein L11, mitochondrial.
   
 
 0.920
MRPL40
39S ribosomal protein L40, mitochondrial.
   
 
 0.917
MRPL30
39S ribosomal protein L30, mitochondrial.
   
 
 0.900
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 
 0.896
MRPL16
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 0.889
MRPL28
39S ribosomal protein L28, mitochondrial.
   
   0.885
MRPL4
39S ribosomal protein L4, mitochondrial.
   
   0.881
MRPL24
39S ribosomal protein L24, mitochondrial; Belongs to the universal ribosomal protein uL24 family.
   
   0.879
MRPL52
39S ribosomal protein L52, mitochondrial isoform B.
   
 
 0.878
MRPL43
39S ribosomal protein L43, mitochondrial.
   
   0.873
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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