STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL1539S ribosomal protein L15, mitochondrial isoform B. (247 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.998
MRPL13
39S ribosomal protein L13, mitochondrial.
  
 0.996
RPL23
60S ribosomal protein L23 isoform A; Belongs to the universal ribosomal protein uL14 family.
  
 0.996
MRPS9
28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.995
MRPL17
39S ribosomal protein L17, mitochondrial.
  
 
 0.995
MRPS6
28S ribosomal protein S6, mitochondrial.
   
 
 0.994
MRPS16
28S ribosomal protein S16, mitochondrial.
   
 
 0.993
MRPL2
39S ribosomal protein L2, mitochondrial isoform A.
  
 0.993
MRPL20
39S ribosomal protein L20, mitochondrial.
   
 
 0.993
MRPL21-1
39S ribosomal protein L21, mitochondrial isoform A.
  
 
 0.993
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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