STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STK38Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (463 aa)    
Predicted Functional Partners:
Y1Q_0007685
Uncharacterized protein.
   
 0.981
FRY
Furry-like protein.
    
 
 0.879
FRYL
Uncharacterized protein.
    
 
 0.879
Y1Q_0007467
Uncharacterized protein.
   
 
 0.842
CDC14A
Dual specificity protein phosphatase CDC14A isoform A.
   
 
 0.842
Y1Q_0013331
Protein S100; Belongs to the S-100 family.
    
 
 0.776
Y1Q_0013261
Serine/threonine-protein kinase MRCK gamma.
 
    
 0.749
DIEXF
Digestive organ expansion factor-like protein.
      
 0.700
DUSP23
Dual specificity protein phosphatase 23.
   
 
 0.696
DIS3L
DIS3-like exonuclease 1; Belongs to the RNR ribonuclease family.
    
 
 0.687
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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