STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIBP2Liprin-beta-2 isoform A. (1034 aa)    
Predicted Functional Partners:
ABTB2
Ankyrin repeat and BTB/POZ domain-containing protein 2.
      
 0.708
RIC8B
Synembryn-B.
      
 0.699
NUAK1
NUAK family SNF1-like kinase 1.
      
 0.670
STAB1
Stabilin-1.
      
 0.666
DRAM2
DNA damage-regulated autophagy modulator protein 2.
      
 0.664
CTTN
Src substrate protein p85 isoform A.
   
0.644
PPFIA1
Liprin-alpha-1 isoform B.
   
0.644
PPFIA3
Uncharacterized protein.
   
0.644
Y1Q_0016916
Uncharacterized protein.
   
 0.644
Y1Q_0019878
Uncharacterized protein.
   
0.644
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.