STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL9ADP-ribosylation factor-like protein 9; Belongs to the small GTPase superfamily. Arf family. (236 aa)    
Predicted Functional Partners:
ITSN1
Intersectin-1.
    
 0.849
ITSN1-2
Uncharacterized protein.
    
 0.763
GAK-2
Uncharacterized protein.
    
 0.706
AP4E1
AP-4 complex subunit epsilon-1 isoform A.
    
 0.630
GBF1
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform C.
    
 0.617
ARFGAP1
ADP-ribosylation factor GTPase-activating protein 1 isoform A.
   
 0.599
COPB1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.583
ARL16
ADP-ribosylation factor-like protein 16.
    
 0.544
GAK
Cyclin-G-associated kinase isoform A.
    
 0.535
MYO9B
Unconventional myosin-IXb isoform B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.530
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.