STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEPROTL1Leptin receptor overlapping transcript-like 1. (131 aa)    
Predicted Functional Partners:
TMEM50A
Transmembrane protein 50A.
   
 
 0.870
TMEM50B
Transmembrane protein 50B.
   
 
 0.809
RAB13
Ras-related protein Rab-13.
    
 
 0.673
TM4SF19
Transmembrane 4 L6 family member 19.
      
 0.554
NAA30
N-alpha-acetyltransferase 30.
      
 0.553
TUT1
Speckle targeted PIP5K1A-regulated poly(A) polymerase.
      
 0.546
ANAPC11
Anaphase-promoting complex subunit 11.
      
 0.473
MOCS1
Molybdenum cofactor biosynthesis protein 1.
      
 0.472
SHISA4
Protein shisa-4.
      
 0.431
LEPR-1
Leptin receptor isoform B.
 
  
 
 0.429
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.