STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALSU1Mitochondrial assembly of ribosomal large subunit protein 1. (198 aa)    
Predicted Functional Partners:
RPL23
60S ribosomal protein L23 isoform A; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.989
MRPL21-1
39S ribosomal protein L21, mitochondrial isoform A.
  
   0.972
MRPL19
39S ribosomal protein L19, mitochondrial.
   
 
 0.967
MRPL20
39S ribosomal protein L20, mitochondrial.
   
 
 0.966
MRPL17
39S ribosomal protein L17, mitochondrial.
  
   0.966
RNMTL1
rRNA methyltransferase 3, mitochondrial.
   
 
 0.964
MRPL32
39S ribosomal protein L32, mitochondrial.
  
 
 0.961
GTPBP10
GTP-binding protein 10.
  
 
 0.957
MRPL47
39S ribosomal protein L47, mitochondrial.
   
   0.950
MRPL24
39S ribosomal protein L24, mitochondrial; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.944
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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