STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1GALT1Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. (400 aa)    
Predicted Functional Partners:
C1GALT1C1
C1GALT1-specific chaperone 1.
    
0.980
ST3GAL1
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
    
 0.961
ST6GALNAC1
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 isoform B; Belongs to the glycosyltransferase 29 family.
    
 0.955
GCNT3
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3.
   
 0.934
ST3GAL2
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
    
 0.909
C1GALT1A
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A.
  
  
 
0.903
NELFCD
Negative elongation factor C/D.
    
 0.891
POC1B
POC1 centriolar protein-like protein B isoform A.
     
 0.878
NELFB
Negative elongation factor B.
   
 0.877
NELFE
Negative elongation factor E.
   
 0.876
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.