STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASXL2-1Putative Polycomb group protein ASXL2 isoform B. (1144 aa)    
Predicted Functional Partners:
BAP1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.946
KDM1B
Lysine-specific histone demethylase 1B.
    
 0.861
OGT
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase subunit isoform B.
    
 0.778
KIFAP3
Kinesin-associated protein 3.
   
 0.754
Y1Q_0019892
Uncharacterized protein.
   
 0.699
MBD5-1
Methyl-CpG-binding domain protein 5 isoform B.
   
 0.673
FOXK1
Forkhead box protein K1.
    
 0.667
FOXK2
Forkhead box protein K2.
    
 0.667
YY1
Transcriptional repressor protein YY1.
     
 0.577
ZNF462
Zinc finger protein 462 isoform B.
     
 0.573
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.