STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG2AUncharacterized protein. (1912 aa)    
Predicted Functional Partners:
WIPI1
WD repeat domain phosphoinositide-interacting protein 1.
    
 0.982
ULK1A
Unc-51 like autophagy activating kinase 1a isoform A.
   
 0.980
WIPI2
WD repeat domain phosphoinositide-interacting protein 2 isoform B.
    
 0.979
ULK2
Serine/threonine-protein kinase ULK2.
   
 0.979
ATG2B
Autophagy-related 2-like protein B isoform A.
  
 
0.918
ATG9A
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 
 0.753
WDR45B
WD repeat domain phosphoinositide-interacting protein 3.
    
 
 0.741
ULK3
Serine/threonine-protein kinase ULK3 isoform B.
   
 
 0.636
PDIK1L
Serine/threonine-protein kinase PDIK1L; Belongs to the protein kinase superfamily.
   
 
 0.615
STK35
Serine/threonine-protein kinase 35.
   
 
 0.615
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
Server load: low (30%) [HD]