STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF151RING finger protein 151. (268 aa)    
Predicted Functional Partners:
BIRC6
Baculoviral IAP repeat-containing protein 6 isoform A.
    
 0.716
MIB2
Uncharacterized protein.
    
 0.690
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.687
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
 0.669
KXD1
KxDL motif-containing protein 1.
    
  0.641
ZFAND4
AN1-type zinc finger protein 4 isoform A.
    
 0.616
TRADD
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 0.548
RIPK4
Receptor-interacting serine/threonine-protein kinase 4.
   
 0.545
TAB2
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2.
    
 0.437
TAB3
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3.
    
 0.437
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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