STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPP1Tripeptidyl-peptidase 1. (428 aa)    
Predicted Functional Partners:
POT1
Protection of telomeres protein 1.
    
 0.753
TAF10
Transcription initiation factor TFIID subunit 10.
 
  
   0.737
PPT1
Palmitoyl-protein thioesterase 1.
   
 
 0.620
FLI1
Friend leukemia integration 1 transcription factor isoform C.
   
 
 0.588
CLN3
Battenin.
      
 0.572
TERF2IP
Telomeric repeat-binding factor 2-interacting protein 1.
    
 0.565
CLN5
Ceroid-lipofuscinosis neuronal protein 5.
      
 0.563
CLN6
Ceroid-lipofuscinosis neuronal protein 6.
     
 0.558
MFSD8
Major facilitator superfamily domain-containing protein 8.
      
 0.539
PRSS2
Trypsin II-P29; Belongs to the peptidase S1 family.
    
 0.524
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.