STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GARNL3GTPase-activating Rap/Ran-GAP domain-like protein 3. (976 aa)    
Predicted Functional Partners:
TBRG1
Transforming growth factor beta regulator 1.
   
  
 0.545
INPP5A
Type I inositol 1,4,5-trisphosphate 5-phosphatase.
   
  
 0.543
CARNMT1
Carnosine N-methyltransferase isoform B.
      
 0.542
TRAPPC10
Trafficking protein particle complex subunit 10.
      
 0.542
EI24
Etoposide-induced 2.4-like protein.
      
 0.467
MANBA
Beta-mannosidase; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.422
HOMER3
Homer protein-like protein 3.
      
 0.418
ST3GAL5-1
Lactosylceramide alpha-2,3-sialyltransferase isoform B; Belongs to the glycosyltransferase 29 family.
      
 0.417
RGS8
Regulator of G-protein signaling 8.
      
 0.403
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.