STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP3K15-2Protein kinase domain-containing protein. (1291 aa)    
Predicted Functional Partners:
NSUN2
tRNA (Cytosine(34)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
      0.554
PRKAB1
5'-AMP-activated protein kinase subunit beta-1.
    
 0.552
PRKAB2-1
5'-AMP-activated protein kinase subunit beta-2 isoform B.
    
 0.552
RPTOR
Regulatory-associated protein of mTOR isoform A.
    
 0.480
Y1Q_0020755
5'-AMP-activated protein kinase subunit gamma-3-like.
   
 0.441
Y1Q_0016784
5'-AMP-activated protein kinase subunit gamma-3-like.
   
 0.441
PRKAG1
5'-AMP-activated protein kinase subunit gamma-1 isoform A.
   
 0.441
Y1Q_0002398
Uncharacterized protein.
   
 0.441
PRKAG2
5'-AMP-activated protein kinase subunit gamma-2.
   
 0.441
TSC2
Tuberin isoform D.
    
 0.419
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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