STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXK1Forkhead box protein K1. (598 aa)    
Predicted Functional Partners:
BAP1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.806
OGT
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase subunit isoform B.
    
 0.717
ASXL2-1
Putative Polycomb group protein ASXL2 isoform B.
    
 0.667
ASXL3
Putative Polycomb group protein ASXL3.
    
 0.639
Y1Q_0003900
HARE-HTH domain-containing protein.
   
 0.605
YY1
Transcriptional repressor protein YY1.
    
 0.573
Y1Q_0020684
Host cell factor 1-like.
    
 0.540
HCFC1
Host cell factor 1.
    
 0.540
HCFC2
Host cell factor 2 isoform A.
    
 0.540
Y1Q_0016713
Uncharacterized protein.
    
 0.540
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.