STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPN3Epsin-3 isoform A. (1353 aa)    
Predicted Functional Partners:
TYMS
Thymidylate synthase.
    
  0.844
HMBS
Porphobilinogen deaminase isoform A.
    
  0.813
SPATA17
Spermatogenesis-associated protein 17.
      
 0.578
SPATA6
Spermatogenesis-associated protein 6 isoform A.
      
 0.562
Y1Q_0005132
Diamine acetyltransferase 2-like.
     
 0.543
COASY
Bifunctional coenzyme A synthase isoform B.
      
 0.543
PUSL1
tRNA pseudouridine synthase.
      
 0.541
SPATA22
Spermatogenesis-associated protein 22.
      
 0.538
SPATA4
Spermatogenesis-associated protein 4.
      
 0.514
SRRM1
Serine/arginine repetitive matrix protein 1 isoform A.
      
 0.503
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.