STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBSCR16Williams-Beuren syndrome chromosomal region 16 protein. (766 aa)    
Predicted Functional Partners:
PDE6D
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
    
 
 0.656
SMIM14
Small integral membrane protein 14.
      
 0.600
APOB
Apolipoprotein B-100.
      
 0.599
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 0.592
LRPAP1
Alpha-2-macroglobulin receptor-associated protein.
      
 0.580
NME6
Nucleoside diphosphate kinase 6; Belongs to the NDK family.
    
 
 0.531
TRUB2
Putative tRNA pseudouridine synthase 2.
    
 
 0.514
NEK6
Serine/threonine-protein kinase Nek6 isoform A; Belongs to the protein kinase superfamily.
    
 0.514
NEK7
Serine/threonine-protein kinase Nek7 isoform B; Belongs to the protein kinase superfamily.
    
 0.514
ZFAND4
AN1-type zinc finger protein 4 isoform A.
    
 0.513
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.