STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TADA2ATranscriptional adapter. (525 aa)    
Predicted Functional Partners:
CCDC101
SAGA-associated factor 29-like protein.
    
 0.993
TRRAP
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.985
TAF9B
Transcription initiation factor TFIID subunit 9B.
    
 0.985
SUPT3H
Transcription initiation SPT3-like protein.
    
 0.979
USP22
Ubiquitin carboxyl-terminal hydrolase.
    
 0.974
SUPT20H
Transcription factor SPT20-like protein isoform C.
    
 0.962
TAF10
Transcription initiation factor TFIID subunit 10.
    
 0.950
ZZZ3
ZZ-type zinc finger-containing protein 3 isoform B.
  
 
 0.932
KAT2B
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
   
 0.926
DHX58
Putative ATP-dependent RNA helicase DHX58 isoform E; Belongs to the small heat shock protein (HSP20) family.
   
 0.926
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.