STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSTO1Misato-like protein 1. (475 aa)    
Predicted Functional Partners:
ATP13A1
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
      
 0.817
OGFOD1
Prolyl 3-hydroxylase OGFOD1.
      
 0.676
TIMM10B
Mitochondrial import inner membrane translocase subunit Tim10 B.
      
 0.566
SLC25A19
Mitochondrial thiamine pyrophosphate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.544
ZNF280D-1
Zinc finger protein 280D isoform A.
      
 0.533
DAP3
28S ribosomal protein S29, mitochondrial.
 
      0.517
PCK1
Uncharacterized protein.
      
 0.468
PHF20L1
PHD finger protein 20-like protein 1 isoform G.
      
 0.463
SCLY
Selenocysteine lyase.
      
 0.460
BCKDHB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
      
 0.459
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.