STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAP328S ribosomal protein S29, mitochondrial. (377 aa)    
Predicted Functional Partners:
MRPS5-1
28S ribosomal protein S5, mitochondrial isoform A; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
MRPS16
28S ribosomal protein S16, mitochondrial.
   
 0.998
MRPS7
28S ribosomal protein S7, mitochondrial.
   
 0.998
MRPS9
28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
   
 0.998
MRPS10
28S ribosomal protein S10, mitochondrial.
   
 0.998
MRPS11
28S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family.
   
 0.997
RPS13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.996
MRPS14
28S ribosomal protein S14, mitochondrial.
    
 0.996
MRPS35
28S ribosomal protein S35, mitochondrial.
   
 0.996
MRPS6
28S ribosomal protein S6, mitochondrial.
   
 0.995
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.